Guidance documents NGS
The documents are meant to provide guidance to the laboratories in the area of application of NGS and have been produced by the Inter EURL (European Union Reference Laboratory ) Working Group on NGS with the aim of being diffused to all the networks of National Reference Laboratories.
The listed documents are aggregated in the Zenodo community 'InterBiorisks-EURLs working group on NGS':
https://zenodo.org/communities/eurls-biorisks_wg_on_ngs
- Overview of conducted and planned PTs – curated by EURL Antimicrobial Resistance (AR)
- Reference Whole Genome Sequencing collection – curated by EURL-Salmonella
- Guidance document for WGS-laboratory procedures – curated by EURL-Parasites
- Bioinformatics tools for basic analysis of Next Generation Sequencing data – curated by EURL-E. coli
- Guidance document for Whole Genome Sequencing - cluster analysis – curated by EURL-Campylobacter
- Guidance document for NGS-Benchmarking – curated by EURL-Listeria monocytogenes
- Inventory of training supports – curated by EURL-Coagulase-Positive Staphylococci (CPS)
- Survey on the use of NGS across the NRLs networks – curated by EURL-E. coli
- Supporting document for preparing high quality DNA for Whole Genome Sequencing – curated by EURL-E. coli